Woocommerce Permalink Acting Weird

I have two websites with exactly the same permalink settings and exactly the same categories, however one of them loads category URLs like:

/shop/categories/categories-injectables/

the other loads them like:

/shop/categories/respiratory/

It seems as though the first website is repeating the name of the parent category in the next part of the domain, can anyone hazard a guess as to why this is the case? Really looking forward to your answers, i’ve been trying to solve this for a while and have come up with nothing from my research.

Cheers.

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